7_R1P.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	7_R1P.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15240137
Sequences flagged as poor quality	0
Sequence length	1-126
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCCACATGCAATTTCTTTTTGGAATATAATCCCAGGTTCTCTGTTGCCCC	27620	0.1812319666155232	No Hit
CTGAGACTGTAACCTCAAAGCTTTCGCGTGAAGAAGTCAGATAACGTGCT	24862	0.1631350164371882	No Hit
CCCGCAGAGAAGGATACAAGCGAATACCGCCCCCCCTTGGGTAAAACCCG	24859	0.1631153315747752	No Hit
CCCCGAACTACCCTCCTTCATTCCTGGATGCCGTGAGTTGAGGGAAGGCA	21039	0.1380499401022445	No Hit
CCCTGAGACTGTAACCTCAAAGCTTTCGCGTGAAGAAGTCAGATAACGTG	20194	0.13250537052258782	No Hit
GTCAATTTCTTTAAGTTTCACTCTTGCGAACGTACTCCCCCCTGAGACTG	18923	0.12416555048028767	No Hit
CCGCAGAGAAGGATACAAGCGAATACCGCCCCCCCTTGGGTAAAACCCGC	18732	0.12291228090666115	No Hit
CGTAAATTTAATATATTCATTGGCGAGACGAGGAACGGGATGAAAAATAA	17191	0.11280082324719261	No Hit
CTCTAATCATCTTCGATCCCCACACTTTGGTTCTTGATTGAGGAAGGTAT	16846	0.11053706406969964	No Hit
ACCGCACGCTCCACGTCTTGTGGTGCCATTCCGTCAATTTCTTTAAGTTT	15895	0.10429696268478426	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTAGGT	2410	44.62747	113
CTAGGTT	2510	43.37332	114
TAGGTTA	2825	38.770172	115
AGGTTAG	3150	34.982	116
GCGCTAG	3150	33.752728	111
ACGCCTA	6500	33.52397	68
AGCCCGA	6690	32.687256	59
CGCTAGG	3300	32.60238	112
TGTTACG	5250	32.29401	3
AGCTAAG	3295	32.07503	13
CTACGAC	7075	31.055876	72
TAAGGGG	11270	31.04124	71
CCCAGGT	11595	30.934004	31
CCAGGTT	11545	30.814386	32
GGTTAGG	3610	30.713696	117
CTAAGTA	3570	29.930964	15
TAGGGTA	3630	29.760397	20
CCCGACC	7400	29.745234	61
TCCCAGG	12250	29.086147	30
TACGACC	7670	28.824602	73