FastQCFastQC Report
Tue 25 Oct 2016
7_R1U.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename7_R1U.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7526
Sequences flagged as poor quality0
Sequence length6-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTCATC100.009110745132.29921114
TATGAAA100.009110745132.29921115
CATCGAG100.009110745132.29921117
TCCTTCA300.003498099561.7720677
Produced by FastQC (version 0.11.5)