6_R2P.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	6_R2P.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15371310
Sequences flagged as poor quality	0
Sequence length	1-126
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTTACCAGATCCGGACAGGGTGAGGATTGACAGATTGAGTGTTCTTTCT	53162	0.3458521101975043	No Hit
GTCAAACAGACGCGCAAGGGAGAAGATATCGTTGCCAGTACTTCTCTCGT	23295	0.15154856677797793	No Hit
CAGGACTACCCGCCGAACTTAAGCATATTACTAAGCGGAGGAAAAGAAAA	20400	0.13271477837607856	No Hit
GGCAGGACTACCCGCCGAACTTAAGCATATTACTAAGCGGAGGAAAAGAA	19966	0.12989133652239138	No Hit
CTGCCAGTAGTCATATGCTTGTTTCAAGGACTTAGCCATGCATGCCTCAG	18126	0.1179209839629804	No Hit
ACCAGATCCGGACAGGGTGAGGATTGACAGATTGAGTGTTCTTTCTCGAT	17960	0.116841049982077	No Hit
GTTTGGTTGATTCCGTCAACGGACGAGATCCAAGCTGCCCAGTAGGATTC	17744	0.1154358346816244	No Hit
TTCTGCCAGTAGTCATATGCTTGTTTCAAGGACTTAGCCATGCATGCCTC	15469	0.10063553464213526	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACAGTT	24270	60.101032	1
TTACCAG	13070	48.42807	3
ACAGTTT	34820	42.30882	2
CTTTACC	16635	38.64176	1
TACCAGA	17225	36.847305	4
CCAGATC	17220	36.79152	6
ACCAGAT	17485	36.335323	5
CAGATCC	17815	35.434414	7
TCCGGAC	18070	35.358616	11
CAGTTTC	41835	35.145535	3
GTTTCTG	84370	33.875496	1
GATCCGG	19520	32.67012	9
ATCCGGA	19915	32.19848	10
GTCAAAC	9830	32.194008	1
TTCTGTA	88710	31.983582	3
TCTGTAC	89475	31.710024	4
AGATCCG	20710	30.678616	8
TGTACTA	93795	30.213167	6
CTGTACT	94560	29.970205	5
ACAGGGT	21240	29.95223	16