FastQCFastQC Report
Tue 25 Oct 2016
2_R1U.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename2_R1U.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7933
Sequences flagged as poor quality0
Sequence length1-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATGCC100.008667599134.55725118
GCGCATG100.008667599134.55725115
GCACGAC100.009072301132.53383103
TCTTCTC100.009279274131.5447899
AAGTGTA100.009702581129.6102994
Produced by FastQC (version 0.11.5)