FastQCFastQC Report
Fri 4 Nov 2016
8_R1U.fastq

Summary

[OK]Basic Statistics

MeasureValue
Filename8_R1U.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5610
Sequences flagged as poor quality0
Sequence length1-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTTTCTGGCGGAGGTAAACGGATTTGCGTGCCAGTCGTCTCTGCTTT70.12477718360071302No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCGATG100.0073433216141.61905114
TGCTCAT100.008452842135.1818292
GCTCATC100.008452842135.1818293
TTGCTCA100.008452842135.1818291
Produced by FastQC (version 0.11.5)