6_R2U.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	6_R2U.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8591
Sequences flagged as poor quality	0
Sequence length	1-126
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCAGAG	10	0.009106307	132.44444	108
GACCCAA	10	0.009106307	132.44444	108
CAAAATA	10	0.009106307	132.44444	110
CCAGAGG	10	0.009297963	131.53104	109
ACGCCTT	10	0.009492279	130.63014	101
AGAAGCA	10	0.009492279	130.63014	100
CCTTGGG	10	0.009492279	130.63014	102
ATCAATT	10	0.009492279	130.63014	93
TCTTTTG	35	0.0051801293	55.98434	103
TCTGTAC	40	2.306116E-4	55.766083	4
TTTCTGT	45	4.125704E-4	49.56985	2
GTTTCTG	45	4.125704E-4	49.56985	1
GTACTAT	50	6.7366153E-4	44.875294	7
TACTATA	50	6.7366153E-4	44.875294	8
TTCTGTA	50	6.9365E-4	44.612865	3
CTGTACT	50	6.9365E-4	44.612865	5
TGTACTA	55	0.0010771581	40.795723	6